Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Ensembl protein families
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: UBFD1 ENSSSCG00000040265

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Description

ubiquitin family domain containing 1 [Source:VGNC Symbol;Acc:VGNC:94658]

Location

Chromosome 3: 22,639,972-22,655,041 reverse strand.

Sscrofa11.1:CM000814.5

About this gene

This gene has 2 transcripts (splice variants) and 212 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
UBFD1-202	ENSSSCT00000058350.2	6627	286aa	ENSSSCP00000057251.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287BM51	<p>APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P5,
UBFD1-201	ENSSSCT00000058602.2	4760	190aa	ENSSSCP00000035496.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZV33 A0A4X1UX83	<p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2,

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Summary

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Gene-based displays