Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Ensembl protein families
- Breeds
  - Gene tree
  - Orthologues
  - Paralogues
Ontologies
- GO: Biological process
- GO: Cellular component
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: TREM1 ENSSSCG00000033251

.

Description

triggering receptor expressed on myeloid cells 1 [Source:VGNC Symbol;Acc:VGNC:94383]

Gene Synonyms

TREM-1

Location

Chromosome 7: 36,510,253-36,531,796 reverse strand.

Sscrofa11.1:CM000818.5

About this gene

This gene has 2 transcripts (splice variants) and 85 orthologues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
TREM1-202	ENSSSCT00000076447.1	1466	252aa	ENSSSCP00000072323.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RD95	<p>APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P5,
TREM1-201	ENSSSCT00000039577.2	1041	250aa	ENSSSCP00000032872.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1SL76 A0A5S6H2E2	<p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2,

.

Summary

.

.

Gene-based displays