Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Ensembl protein families
- Breeds
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
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Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ZNF536 ENSSSCG00000029234

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Description

zinc finger protein 536 [Source:VGNC Symbol;Acc:VGNC:95262]

Location

Chromosome 6: 40,292,351-40,771,730 forward strand.

Sscrofa11.1:CM000817.5

About this gene

This gene has 3 transcripts (splice variants), 255 orthologues and 13 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ZNF536-203	ENSSSCT00000046119.2	5278	1303aa	ENSSSCP00000035479.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286ZVF8	<p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2,
ZNF536-201	ENSSSCT00000052961.2	5157	1399aa	ENSSSCP00000045911.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287APC8	<p>APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P5,
ZNF536-202	ENSSSCT00000026089.3	5009	1302aa	ENSSSCP00000022723.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3LF83	<p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2,

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Summary

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Gene-based displays