Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Ensembl protein families
- Breeds
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: GALNT13 ENSSSCG00000022671

.

Description

polypeptide N-acetylgalactosaminyltransferase 13 [Source:VGNC Symbol;Acc:VGNC:95992]

Location

Chromosome 15: 61,440,656-62,047,336 forward strand.

Sscrofa11.1:CM000826.5

About this gene

This gene has 5 transcripts (splice variants), 245 orthologues and 19 paralogues.

Transcripts

Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
GALNT13-202	ENSSSCT00000074747.1	6102	507aa	ENSSSCP00000068574.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5G2RD09	-
GALNT13-201	ENSSSCT00000054425.2	4965	572aa	ENSSSCP00000053112.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287B9E6 A0A4X1VKQ3	<p>APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P5,
GALNT13-203	ENSSSCT00000065917.2	4894	556aa	ENSSSCP00000047448.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A287AU55 A0A4X1VSE6	<p>APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT1,
GALNT13-204	ENSSSCT00000024665.3	4795	523aa	ENSSSCP00000025193.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A4X1VRA8 I3LM72	-
GALNT13-205	ENSSSCT00000027912.3	4528	558aa	ENSSSCP00000028132.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3LVI0	-

.

Summary

.

.

Gene-based displays