Description
OFD1 centriole and centriolar satellite protein [Source:NCBI gene (formerly Entrezgene);Acc:100513249]
Location
Chromosome X: 10,361,511-10,439,599 forward strand.
Sscrofa11.1:CM000830.5
About this gene
This gene has 5 transcripts (splice variants), 187 orthologues and 1 paralogue.
Transcripts
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|
| - | ENSSSCT00000087412.1 | 6769 | 1004aa | ENSSSCP00000072661.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A480VBY0 A0A4X1UU58 | <p>APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P5, |
| - | ENSSSCT00000088466.1 | 6766 | 1003aa | ENSSSCP00000063803.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2QNZ5 | <p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2, |
| - | ENSSSCT00000072955.1 | 6646 | 963aa | ENSSSCP00000063338.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A5G2QMJ6 | <p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2, |
| - | ENSSSCT00000060499.2 | 3257 | 981aa | ENSSSCP00000041613.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | A0A287ACC2 A0A4X1UTB5 | <p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2, |
| - | ENSSSCT00000013264.5 | 3159 | 995aa | ENSSSCP00000012908.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | F1SRH9 | <p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2, |
