Transcript: Rprd1a-201 ENSMUST00000046206.5

Description

regulation of nuclear pre-mRNA domain containing 1A [Source:MGI Symbol;Acc:MGI:2385066]

Location

About this transcript

This transcript has 7 exons, is annotated with 11 domains and features, is associated with 1504 variant alleles and maps to 320 oligo probes.

Gene

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
Rprd1a-201	ENSMUST00000046206.5	4299	312aa	ENSMUSP00000043618.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS29102	Q8VDS4	<p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, <p>APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P1,
Rprd1a-202	ENSMUST00000234403.2	2950	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
Rprd1a-203	ENSMUST00000234721.2	1961	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Protein summary