Description
aspartate beta-hydroxylase domain containing 2 [Source:MGI Symbol;Acc:MGI:1920148]
Gene Synonyms
2900006N09Rik, 9230106G13Rik
Location
Chromosome 5: 112,532,220-112,540,079 reverse strand.
About this transcript
This transcript has 3 exons, is annotated with 5 domains and features, is associated with 547 variant alleles and maps to 185 oligo probes.
Gene
This transcript is a product of gene ENSMUSG00000029348.12 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | Flags |
|---|---|---|---|---|---|---|---|---|
| Asphd2-201 | ENSMUST00000031291.9 | 2678 | 343aa | ENSMUSP00000031291.8 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS19542 | Q80VP9 | <p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, <p>APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P1, |
| Asphd2-207 | ENSMUST00000200227.2 | 1322 | 155aa | ENSMUSP00000142729.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | A0A0G2JED5 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, <p>TSL 3: A transcript where the only support is from a single EST</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:3, |
| Asphd2-203 | ENSMUST00000197585.5 | 1086 | 51aa | ENSMUSP00000142418.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | A0A0G2JDL8 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, <p>TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:2, |
| Asphd2-205 | ENSMUST00000199095.2 | 808 | 28aa | ENSMUSP00000142842.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | A0A0G2JEN6 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, <p>TSL 3: A transcript where the only support is from a single EST</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:3, |
| Asphd2-202 | ENSMUST00000196256.2 | 717 | 92aa | ENSMUSP00000143290.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | A0A0G2JFS8 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, <p>TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:2, |
| Asphd2-206 | ENSMUST00000199906.2 | 654 | 63aa | ENSMUSP00000142332.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | A0A0G2JDE0 | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, <p>TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:2, |
| Asphd2-204 | ENSMUST00000198357.2 | 668 | No protein | - | Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript | - | - | <p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, |