Description
epididymal sperm binding protein 1 [Source:HGNC Symbol;Acc:HGNC:14417]
Gene Synonyms
E12, EDDM12, HE12
Location
Chromosome 19: 48,008,649-48,025,142 forward strand.
About this transcript
This transcript has 7 exons, is annotated with 30 domains and features, is associated with 5373 variant alleles and maps to 238 oligo probes.
Gene
This transcript is a product of gene ENSG00000169393.9 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq Match | Flags |
|---|---|---|---|---|---|---|---|---|---|
| ELSPBP1-201 | ENST00000339841.7 | 1079 | 223aa | ENSP00000340660.2 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS12708 | A0A384NKL6 Q96BH3 | NM_022142.5 | <p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, <p>APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P2, The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select v0.92, |
| ELSPBP1-206 | ENST00000619003.4 | 893 | 220aa | ENSP00000481506.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | A0A087WY45 | - | <p>TSL 5: A transcript where no single transcript supports the model structure.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:5, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, <p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2, |
| ELSPBP1-203 | ENST00000593782.1 | 696 | 154aa | ENSP00000472960.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | M0R331 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, <p>TSL 5: A transcript where no single transcript supports the model structure.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:5, |
| ELSPBP1-204 | ENST00000596043.5 | 574 | 150aa | ENSP00000470903.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | M0R006 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, <p>TSL 3: A transcript where the only support is from a single EST</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:3, |
| ELSPBP1-205 | ENST00000597519.5 | 557 | 75aa | ENSP00000471690.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | M0R179 | - | <p>TSL 3: A transcript where the only support is from a single EST</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:3, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, |
| ELSPBP1-202 | ENST00000593413.1 | 456 | 76aa | ENSP00000470551.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | M0QZH6 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, <p>TSL 3: A transcript where the only support is from a single EST</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:3, |