Description
CD226 molecule [Source:HGNC Symbol;Acc:HGNC:16961]
Gene Synonyms
DNAM-1, DNAM1, PTA1, TLiSA1
Location
Chromosome 18: 69,864,115-69,947,419 reverse strand.
About this transcript
This transcript has 7 exons, is annotated with 6 domains and features, is associated with 22641 variant alleles and maps to 150 oligo probes.
Gene
This transcript is a product of gene ENSG00000150637.9 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq Match | Flags |
|---|---|---|---|---|---|---|---|---|---|
| CD226-207 | ENST00000582621.6 | 12518 | 336aa | ENSP00000461947.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11997 | Q15762 | NM_001303618.2 | <p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, <p>APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P1, The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select v0.92, |
| CD226-201 | ENST00000280200.8 | 12319 | 336aa | ENSP00000280200.4 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS11997 | Q15762 | - | <p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, <p>APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P1, |
| CD226-206 | ENST00000581982.5 | 2157 | 181aa | ENSP00000464084.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS77197 | J3QR77 | - | <p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, |
| CD226-202 | ENST00000577287.5 | 1009 | 181aa | ENSP00000462453.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS77197 | J3QR77 | - | <p>TSL 3: A transcript where the only support is from a single EST</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:3, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, |
| CD226-204 | ENST00000579496.5 | 1168 | 276aa | ENSP00000463927.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | J3QQW1 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, <p>TSL 5: A transcript where no single transcript supports the model structure.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:5, |
| CD226-205 | ENST00000580335.1 | 930 | 127aa | ENSP00000463335.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | J3QL19 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, <p>TSL 4: A transcript where the best supporting EST is flagged as suspect</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:4, |
| CD226-208 | ENST00000583955.5 | 579 | 132aa | ENSP00000464334.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | J3QRQ4 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, <p>TSL 5: A transcript where no single transcript supports the model structure.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:5, |
| CD226-203 | ENST00000578928.1 | 474 | 37aa | ENSP00000463152.1 | Nonsense mediated decay | - | J3QKM7 | - | 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete, <p>TSL 4: A transcript where the best supporting EST is flagged as suspect</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:4, |