Description
polycystin 2 like 2, transient receptor potential cation channel [Source:HGNC Symbol;Acc:HGNC:9012]
Gene Synonyms
TRPP5
Location
Chromosome 5: 137,887,968-137,906,277 forward strand.
About this transcript
This transcript has 6 exons, is annotated with 3 domains and features, is associated with 4603 variant alleles and maps to 375 oligo probes.
Gene
This transcript is a product of gene ENSG00000078795.17 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq Match | Flags |
|---|---|---|---|---|---|---|---|---|---|
| PKD2L2-205 | ENST00000508638.5 | 2333 | 523aa | ENSP00000423382.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58971 | Q9NZM6-6 | - | <p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, |
| PKD2L2-206 | ENST00000508883.6 | 2291 | 624aa | ENSP00000424725.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS78062 | Q9NZM6-1 | NM_001300921.2 | <p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, <p>APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P1, The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select v0.92, |
| PKD2L2-201 | ENST00000290431.5 | 2202 | 613aa | ENSP00000290431.5 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS43367 | Q9NZM6-5 | - | <p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, |
| PKD2L2-203 | ENST00000502810.5 | 2185 | 602aa | ENSP00000425513.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS58972 | Q9NZM6-7 | - | <p>TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:2, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, |
| PKD2L2-204 | ENST00000503015.5 | 1927 | 182aa | ENSP00000424885.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | D6RF71 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, <p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, |
| PKD2L2-207 | ENST00000511176.1 | 830 | 84aa | ENSP00000423926.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | D6RBX8 | - | 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete, <p>TSL 3: A transcript where the only support is from a single EST</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:3, |
| PKD2L2-202 | ENST00000414094.6 | 930 | 57aa | ENSP00000388060.2 | Nonsense mediated decay | - | Q9NZM6-3 | - | <p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, |