Transcript: CCDC71L-201 ENST00000315965.6

Description

coiled-coil domain containing 71 like [Source:HGNC Symbol;Acc:HGNC:26685]

Gene Synonyms

C7orf74, FLJ36031

Location

Chromosome 7: 106,659,317-106,660,926 reverse strand.

About this transcript

This transcript has 3 exons, is annotated with 10 domains and features, is associated with 710 variant alleles and maps to 314 oligo probes.

Gene

This transcript is a product of gene ENSG00000253276.4 Show transcript tableHide transcript table

Name	Transcript ID	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
CCDC71L-202	ENST00000523505.3	6799	235aa	ENSP00000430897.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS55151	Q8N9Z2-1	NM_175884.6	<p>TSL NA: A transcript that was not analysed for TSL.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:NA, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, <p>APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P1, The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select v0.92,
CCDC71L-201	ENST00000315965.6	1575	316aa	ENSP00000479540.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A0A0C4DGU7	-	<p>TSL 5: A transcript where no single transcript supports the model structure.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:5, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 1,575 bps, Translation length: 316 residues

Transcript Support Level (TSL)

TSL:5

Version

ENST00000315965.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Frameshift introns

Frameshift introns occur at intron number(s) 2.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: CCDC71L-201 ENST00000315965.6

Summary

Transcript-based displays

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Transcript: CCDC71L-201 ENST00000315965.6

Summary

Transcript-based displays

About Us

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