Description
stimulated by retinoic acid 8 [Source:HGNC Symbol;Acc:HGNC:30653]
Location
Chromosome 7: 135,231,979-135,258,492 forward strand.
About this transcript
This transcript has 9 exons, is annotated with 5 domains and features, is associated with 6991 variant alleles and maps to 220 oligo probes.
Gene
This transcript is a product of gene ENSG00000146857.4 Show transcript tableHide transcript table
| Name | Transcript ID | bp | Protein | Translation ID | Biotype | CCDS | UniProt Match | RefSeq Match | Flags |
|---|---|---|---|---|---|---|---|---|---|
| STRA8-201 | ENST00000275764.3 | 993 | 330aa | ENSP00000275764.3 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | CCDS5839 | Q7Z7C7 | - | <p>TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA.</p><p>The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript.</p>TSL:1, The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, <p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2, |
| STRA8-202 | ENST00000662584.1 | 1212 | 379aa | ENSP00000499386.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | A0A590UJF1 | - | The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, <p>APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS P4, |
| STRA8-203 | ENST00000667288.1 | 993 | 308aa | ENSP00000499721.1 | Gene/transcipt that contains an open reading frame (ORF).Protein coding | - | A0A590UK75 | - | The GENCODE set is the gene set for human and mouse. <a href="/Help/Glossary?id=500" class="popup">GENCODE Basic</a> is a subset of representative transcripts (splice variants).GENCODE basic, <p>APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species.</p><p>APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene.</p>APPRIS ALT2, |